Makefile

default: groupConnectivity.so clean_obj

.PHONY: test

groupConnectivity.so: groupConnectivity.pyx group-connectivity.h setup.py compileTimeOptions.h generateCompileTimeOptions.sh rings.h fast-array.h twoCuts.h parmap.py groupConnectivityNaive.py
	./generateCompileTimeOptions.sh > options.h
	python2 setup.py build_ext
	cp build/lib*/groupConnectivity.so .

clean_obj:
	rm -f *.o groupConnectivity.cpp options.h
	rm -rf build

clean: clean_obj
	rm -f groupConnectivity.so

test: *.py
	python2 parmap.py
	python2 groupConnectivityNaive.py